top of page

CircRNA

chr10|70857613|70869897|+|4|circRNA|SGPL1|NM_003901|6,7,8,9

CircRNA UID

circSGPL1(6,7,8,9)

Gene

SGPL1

Open Reading Frame (ORF)

MKIVRVPLTKMMEVDVRTPSGKRGEPLEQCTVGRRSSLSSL

Peptide

MMEVDVRTPSGK

ORF Found in Long-Read

false

Peptide Length

12

Stop Codon

TGA

Peptide Type

Junction

Frame

2

Proteome Support

TCGA

ORF Type

Junction

Start Codon

ATG

Number of Amino Acids from 3' Exons

7

Number of Amino Acids from 5' Exons

5

Short-Read Rescue Status

NA

CircRNA Exists in PepTransDB

false

Differentially Expressed in mCRC

NA

Peptide Exists in PepTransDB

false

Ribo-Seq Peptide Support

Ribo-Seq CircRNA Support

TransCirc

TranCirc

Neoantigen Support

false

Follow Us:

  • Twitter Clean
bottom of page